Poseidon - Archaeogenetic Data Management

Partner Dienst

Web-Anwendung

Tool / Client

Bibliothek / API

Datenkuratierung

Speicherung

Daten-Services

The study of ancient human genomes, archaeo- or palaeogenetics, has accelerated in the last ten years, with now thousands of new ancient genomes being released each year. Operating at the interface of genetics, anthro-pology and archaeology, this data includes features from all three fields, including rich meta- and context-data, for example regarding spatiotemporal provenience. While archives and standards for genetic sequencing data al-ready exist, no such infrastructure exists for combined genetic and meta-data that could ensure FAIR principles across the field. Here, we present Poseidon, a framework for open and FAIR data handling in archaeogenetics, including a specified package format, software tools, and public, community-maintained online archives. Poseidon emphasises human- and machine-readable data storage, the development of convenient and interoperable command line software, and a high degree of source granularity to elevate the original data publication to the main unit of long-term curation.

Projektende

https://www.poseidon-adna.org/#/archive_submission_guide https://www.poseidon-adna.org/#/archive_reviewer_guide https://www.poseidon-adna.org/#/trident https://www.poseidon-adna.org/#/xerxes https://www.poseidon-adna.org/#/qjanno https://www.poseidon-adna.org/#/janno_r_package https://www.poseidon-adna.org/#/minotaur https://www.poseidon-adna.org/#/web_api https://www.poseidon-adna.org/#/archive_overview

Matrix Chat https://app.gitter.im/#/room/!TycQipeBdEPTHWqilU:gitter.im Mastodon Channel https://ecoevo.social/@poseidon

N4O Homepage

https://doi.org/10.7554/eLife.98317.1 https://www.github.com/poseidon-framework

Final Release